dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02493
Location and strand information: 206506 - 209376 (+)
Family: 4.A.2.1.17
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02494
Location and strand information: 209376 - 210320 (+)
Family: PfkB
Protein type: STP
Protein description: Tagatose-6-phosphate kinase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02495
Location and strand information: 210322 - 212079 (+)
Family: 4.A.2.1.17
Protein type: TC
Protein description: PTS system fructose-specific EIIB'BC component

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02496
Location and strand information: 212232 - 213626 (-)
Family: null
Protein type: null
Protein description: UDP-glucose 6-dehydrogenase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02497
Location and strand information: 213623 - 214036 (-)
Family: null
Protein type: null
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02498
Location and strand information: 214033 - 214380 (-)
Family: 2.A.7.22.1
Protein type: TC
Protein description: 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02499
Location and strand information: 214377 - 216026 (-)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 10.1672
Protein molecular weight: 61839.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02500
Location and strand information: 216023 - 216910 (-)
Family: null
Protein type: null
Protein description: putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02501
Location and strand information: 216907 - 218895 (-)
Family: null
Protein type: null
Protein description: Bifunctional polymyxin resistance protein ArnA

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02502
Location and strand information: 218892 - 219911 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 8.0393
Protein molecular weight: 37296.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02503
Location and strand information: 219908 - 221056 (-)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02504
Location and strand information: 221444 - 222889 (-)
Family: GT4
Protein type: CAZyme
Protein description: Alginate biosynthesis protein AlgA
Protein isoelectric point: 5.5476
Protein molecular weight: 53169.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02505
Location and strand information: 223086 - 223736 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02506
Location and strand information: 223809 - 224984 (-)
Family: null
Protein type: null
Protein description: putative alginate O-acetylase AlgJ

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02507
Location and strand information: 224999 - 226561 (-)
Family: 2.A.50.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02508
Location and strand information: 226803 - 227906 (-)
Family: PL5|PL5_1
Protein type: CAZyme
Protein description: Alginate lyase
Protein isoelectric point: 8.7042
Protein molecular weight: 40829.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02509
Location and strand information: 227910 - 229334 (-)
Family: null
Protein type: null
Protein description: Alginate biosynthesis protein AlgX

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02510
Location and strand information: 229347 - 230978 (-)
Family: null
Protein type: null
Protein description: Mannuronan C5-epimerase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02511
Location and strand information: 230999 - 232471 (-)
Family: 1.B.13.1.1
Protein type: TC
Protein description: Alginate production protein AlgE

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02512
Location and strand information: 232468 - 233895 (-)
Family: null
Protein type: null
Protein description: Alginate biosynthesis protein AlgK

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02513
Location and strand information: 233909 - 235078 (-)
Family: null
Protein type: null
Protein description: Mannuronan synthase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02514
Location and strand information: 235161 - 236642 (-)
Family: GT2
Protein type: CAZyme
Protein description: Mannuronan synthase
Protein isoelectric point: 10.2781
Protein molecular weight: 56325.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02515
Location and strand information: 236784 - 238094 (-)
Family: null
Protein type: null
Protein description: GDP-mannose 6-dehydrogenase

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02516
Location and strand information: 238997 - 239776 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02517
Location and strand information: 239883 - 240965 (-)
Family: 3.A.1.10.4
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02518
Location and strand information: 240970 - 241887 (-)
Family: null
Protein type: null
Protein description: Ornithine carbamoyltransferase, anabolic

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02519
Location and strand information: 242202 - 242633 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02520
Location and strand information: 243027 - 246014 (-)
Family: 1.B.12.5.6
Protein type: TC
Protein description: Extracellular serine protease

Gene clsuter ID: MGYG000002463_13|CGC3
Gene ID: MGYG000002463_02521
Location and strand information: 246313 - 248421 (+)
Family: 3.D.1.9.2
Protein type: TC
Protein description: Nitrate reductase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alginate download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002463_02493	hypothetical protein	TC	206506	209376	+	4.A.2.1.17
MGYG000002463_02494	Tagatose-6-phosphate kinase	STP	209376	210320	+	PfkB
MGYG000002463_02495	PTS system fructose-specific EIIB'BC component	TC	210322	212079	+	4.A.2.1.17
MGYG000002463_02496	UDP-glucose 6-dehydrogenase	null	212232	213626	-	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000002463_02497	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF	null	213623	214036	-	No domain
MGYG000002463_02498	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE	TC	214033	214380	-	2.A.7.22.1
MGYG000002463_02499	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	214377	216026	-	GT83
MGYG000002463_02500	putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD	null	216023	216910	-	Polysacc_deac_1
MGYG000002463_02501	Bifunctional polymyxin resistance protein ArnA	null	216907	218895	-	Formyl_trans_N\| Formyl_trans_C\| Epimerase
MGYG000002463_02502	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	218892	219911	-	GT2
MGYG000002463_02503	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	219908	221056	-	Aminotran_1_2
MGYG000002463_02504	Alginate biosynthesis protein AlgA	CAZyme	221444	222889	-	GT4
MGYG000002463_02505	hypothetical protein	null	223086	223736	-	AlgF
MGYG000002463_02506	putative alginate O-acetylase AlgJ	null	223809	224984	-	ALGX
MGYG000002463_02507	hypothetical protein	TC	224999	226561	-	2.A.50.2.1
MGYG000002463_02508	Alginate lyase	CAZyme	226803	227906	-	PL5\| PL5_1
MGYG000002463_02509	Alginate biosynthesis protein AlgX	null	227910	229334	-	ALGX\| CBM_26
MGYG000002463_02510	Mannuronan C5-epimerase	null	229347	230978	-	NosD
MGYG000002463_02511	Alginate production protein AlgE	TC	230999	232471	-	1.B.13.1.1
MGYG000002463_02512	Alginate biosynthesis protein AlgK	null	232468	233895	-	No domain
MGYG000002463_02513	Mannuronan synthase	null	233909	235078	-	PilZ\| HlyD_3
MGYG000002463_02514	Mannuronan synthase	CAZyme	235161	236642	-	GT2
MGYG000002463_02515	GDP-mannose 6-dehydrogenase	null	236784	238094	-	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000002463_02516	hypothetical protein	null	238997	239776	-	H2O2_YaaD
MGYG000002463_02517	Spermidine/putrescine import ATP-binding protein PotA	TC	239883	240965	-	3.A.1.10.4
MGYG000002463_02518	Ornithine carbamoyltransferase, anabolic	null	240970	241887	-	OTCace_N\| OTCace
MGYG000002463_02519	hypothetical protein	null	242202	242633	+	No domain
MGYG000002463_02520	Extracellular serine protease	TC	243027	246014	-	1.B.12.5.6
MGYG000002463_02521	Nitrate reductase	TC	246313	248421	+	3.D.1.9.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature